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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10419205 chr19:19987491 G/A CXorf61 chrX:115592849-115594164:- 0.54 7.89 1.9E-10 Box Plot
ACC rs10421447 chr19:19982731 A/C CXorf61 chrX:115592849-115594164:- 0.59 9.1 2.42E-12 Box Plot
ACC rs10432489 chr2:181677803 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.89 1.9E-10 Box Plot
ACC rs10494220 chr1:119572398 C/T PRHOXNB chr13:28552243-28562774:- 0.64 8.76 8.23E-12 Box Plot
ACC rs10494221 chr1:119634224 C/T PRHOXNB chr13:28552243-28562774:- 0.63 8.69 1.06E-11 Box Plot
ACC rs10496406 chr2:107401252 C/G PRAMEF16 chr1:13495254-13498260:+ 0.67 9.56 4.72E-13 Box Plot
ACC rs10519039 chr15:59992758 G/T PRHOXNB chr13:28552243-28562774:- -0.69 -9.2 1.72E-12 Box Plot
ACC rs10520567 chr18:37102852 C/T PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs10547301 chr13:105324245 TACACACAC/T PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs10688856 chr8:74627698 A/AAAAG PRHOXNB chr13:28552243-28562774:- 0.55 7.94 1.6E-10 Box Plot
ACC rs10719529 chr6:119273906 CT/C ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs1074735 chr16:52327002 T/C GAGE2D chrX:49207160-49214420:+ 0.84 8.93 4.53E-12 Box Plot
ACC rs10771311 chr12:27062957 C/T MCAT chr22:43528212-43539400:- 0.66 7.55 6.49E-10 Box Plot
ACC rs10772366 chr12:7278461 T/C CSMD1 chr8:2792875-4852494:- -0.93 -8.04 1.1E-10 Box Plot
ACC rs10772367 chr12:7278538 C/G CSMD1 chr8:2792875-4852494:- -0.93 -8.04 1.1E-10 Box Plot